Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV30A0A087WSZ9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV30A0A087WSZ9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV30A0A087WSZ9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV30A0A087WSZ9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV30A0A087WSZ9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV30A0A087WSZ9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV30A0A087WSZ9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV30A0A087WSZ9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRAV30A0A087WSZ9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 PRORSD1P-201ENST00000295112 541 ntBASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 SLC25A1P2-201ENST00000430693 912 ntBASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 TSPY17P-201ENST00000450329 467 ntBASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 REXO1L10P-201ENST00000615707 1290 ntBASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 REXO1L12P-201ENST00000622156 912 ntBASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 AC113410.3-201ENST00000623366 203 ntBASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 OR6D1P-203ENST00000641209 4860 ntBASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV30A0A087WSZ9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 MIR718-201ENST00000390190 70 ntBASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 GCSHP5-201ENST00000443090 522 ntBASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 AC026471.5-201ENST00000615068 467 ntBASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 AC138028.4-201ENST00000564984 1845 ntBASIC14.34□□□□□ -0.11
TRAV30A0A087WSZ9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TRAV30A0A087WSZ9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV30A0A087WSZ9 AC046158.3-201ENST00000624947 2558 ntBASIC14.33□□□□□ -0.11
TRAV30A0A087WSZ9 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV30A0A087WSZ9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV30A0A087WSZ9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV30A0A087WSZ9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV30A0A087WSZ9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV30A0A087WSZ9 KRT8P50-201ENST00000562022 1438 ntBASIC14.33□□□□□ -0.11
TRAV30A0A087WSZ9 HOXB1-202ENST00000577092 1414 ntBASIC14.33□□□□□ -0.11
TRAV30A0A087WSZ9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms