Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 AC120024.1-201ENST00000562672 995 ntBASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 AL137784.3-201ENST00000623858 2288 ntBASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 GRK6P1-201ENST00000400595 1711 ntBASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 KRT16P6-202ENST00000425692 1426 ntBASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 AC138035.3-201ENST00000622706 2791 ntBASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
LINC01558Q9Y6Z2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms