Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNX9Q9Y5X1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 AC104581.1-202ENST00000635932 2618 ntBASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 CHCHD2P8-201ENST00000429873 447 ntBASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 AC113404.2-201ENST00000507884 177 ntBASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.49■□□□□ 0.71
SNX9Q9Y5X1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 ATP5G2P1-201ENST00000433580 426 ntBASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 NPAP1P7-201ENST00000613027 823 ntBASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNX9Q9Y5X1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 AP002383.4-201ENST00000442518 975 ntBASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 AC092119.3-201ENST00000612618 583 ntBASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX9Q9Y5X1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms