Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHGB3Q9Y5G1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 ESPNP-201ENST00000270691 2015 ntBASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 TERF1P1-201ENST00000311003 1181 ntBASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 AC005521.1-201ENST00000393351 872 ntBASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 AP000593.1-201ENST00000393668 712 ntBASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 CCR12P-201ENST00000446203 998 ntBASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB3Q9Y5G1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB3Q9Y5G1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB3Q9Y5G1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PCDHGB3Q9Y5G1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB3Q9Y5G1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB3Q9Y5G1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHGB3Q9Y5G1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PCDHGB3Q9Y5G1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB3Q9Y5G1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB3Q9Y5G1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 AL023284.2-201ENST00000405850 579 ntBASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 KRT18P41-201ENST00000518924 1277 ntBASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 AC008622.2-201ENST00000617006 1229 ntBASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 AC010653.2-201ENST00000623505 997 ntBASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 AL590326.2-201ENST00000625139 305 ntBASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 AC116562.4-202ENST00000641738 218 ntBASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 AC008556.1-201ENST00000610908 2040 ntBASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGB3Q9Y5G1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 AL499627.1-201ENST00000569373 2188 ntBASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 MIR564-202ENST00000385049 94 ntBASIC17.32■□□□□ 0.36
PCDHGB3Q9Y5G1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms