Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 MIR4497-201ENST00000583208 89 ntBASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 AC113410.3-201ENST00000623366 203 ntBASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
R3HCC1Q9Y3T6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HCC1Q9Y3T6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
R3HCC1Q9Y3T6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
R3HCC1Q9Y3T6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
R3HCC1Q9Y3T6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.89■□□□□ 0.94
R3HCC1Q9Y3T6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
R3HCC1Q9Y3T6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
R3HCC1Q9Y3T6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
R3HCC1Q9Y3T6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 HLA-A-209ENST00000638375 975 ntBASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.89■□□□□ 0.93
R3HCC1Q9Y3T6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 AL391005.1-201ENST00000623953 2435 ntBASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 TSPY7P-201ENST00000431358 1114 ntBASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 AL160286.2-201ENST00000567150 934 ntBASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 AC026471.5-201ENST00000615068 467 ntBASIC20.88■□□□□ 0.93
R3HCC1Q9Y3T6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms