Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.34■□□□□ 0.21
POLR1DQ9Y2S0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR1DQ9Y2S0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR1DQ9Y2S0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR1DQ9Y2S0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR1DQ9Y2S0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
POLR1DQ9Y2S0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.33■□□□□ 0.21
POLR1DQ9Y2S0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
POLR1DQ9Y2S0 AL354751.1-201ENST00000412768 1863 ntBASIC16.33■□□□□ 0.21
POLR1DQ9Y2S0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
POLR1DQ9Y2S0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
POLR1DQ9Y2S0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
POLR1DQ9Y2S0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
POLR1DQ9Y2S0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 TSPY17P-201ENST00000450329 467 ntBASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 AC116562.4-202ENST00000641738 218 ntBASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR1DQ9Y2S0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 MIR4674-201ENST00000582457 87 ntBASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR1DQ9Y2S0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 KRT18P41-201ENST00000518924 1277 ntBASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 AP003041.3-201ENST00000527151 707 ntBASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 BX088651.1-201ENST00000540551 451 ntBASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 FITM1-202ENST00000559294 800 ntBASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR1DQ9Y2S0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms