Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HHLA3Q9XRX5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 AC116562.2-201ENST00000507042 360 ntBASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 AC026471.5-201ENST00000615068 467 ntBASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 AD000864.1-201ENST00000624076 2295 ntBASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HHLA3Q9XRX5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 AC108860.2-201ENST00000562760 2183 ntBASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 SLC25A6P5-201ENST00000435663 894 ntBASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 CKBP1-201ENST00000565489 1086 ntBASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 SLC25A1P4-201ENST00000567977 778 ntBASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 AP000692.2-201ENST00000608391 879 ntBASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 DGCR10-201ENST00000609839 495 ntBASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HHLA3Q9XRX5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms