Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 MIR3917-201ENST00000580971 93 ntBASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 AC004263.2-201ENST00000617183 678 ntBASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.52■■□□□ 1.36
PDZRN3Q9UPQ7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 AC018470.1-201ENST00000624790 3129 ntBASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 MCCD1P1-208ENST00000445732 328 ntBASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 AL662844.1-201ENST00000546340 181 ntBASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 HEIH-201ENST00000623091 1652 ntBASIC23.51■■□□□ 1.35
PDZRN3Q9UPQ7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 AL391807.1-203ENST00000604392 2365 ntBASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 AC036111.1-201ENST00000533973 1582 ntBASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 AL022342.1-201ENST00000400363 863 ntBASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 AC112497.1-201ENST00000624824 639 ntBASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 AL499627.1-201ENST00000569373 2188 ntBASIC23.5■■□□□ 1.35
PDZRN3Q9UPQ7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 MTMR9LP-203ENST00000426597 1545 ntBASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 AL732292.2-201ENST00000609649 430 ntBASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.49■■□□□ 1.35
PDZRN3Q9UPQ7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDZRN3Q9UPQ7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.48■■□□□ 1.35
PDZRN3Q9UPQ7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDZRN3Q9UPQ7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PDZRN3Q9UPQ7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PDZRN3Q9UPQ7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms