Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR3Q9UNL2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR3Q9UNL2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SSR3Q9UNL2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 KRT8P3-201ENST00000519669 1449 ntBASIC16.29■□□□□ 0.2
SSR3Q9UNL2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.29■□□□□ 0.2
SSR3Q9UNL2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSR3Q9UNL2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 BX276092.2-201ENST00000417668 665 ntBASIC16.28■□□□□ 0.2
SSR3Q9UNL2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 HLA-A-209ENST00000638375 975 ntBASIC16.28■□□□□ 0.2
SSR3Q9UNL2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 KRT8P41-201ENST00000533985 1514 ntBASIC16.28■□□□□ 0.2
SSR3Q9UNL2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SSR3Q9UNL2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.27■□□□□ 0.2
SSR3Q9UNL2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSR3Q9UNL2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSR3Q9UNL2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms