Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 KRT8P11-201ENST00000409686 1436 ntBASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT11Q9UKZ1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 C2orf69P3-201ENST00000565542 1120 ntBASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CNOT11Q9UKZ1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 CKBP1-201ENST00000565489 1086 ntBASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 AC145285.6-201ENST00000604632 637 ntBASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 LINC01568-207ENST00000641790 1380 ntBASIC17.53■□□□□ 0.4
CNOT11Q9UKZ1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 AC106820.2-201ENST00000563775 3264 ntBASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT11Q9UKZ1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms