Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.48■□□□□ 0.71
SIX4Q9UIU6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX4Q9UIU6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
SIX4Q9UIU6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX4Q9UIU6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SIX4Q9UIU6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX4Q9UIU6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 AL845331.1-201ENST00000424978 1190 ntBASIC19.47■□□□□ 0.71
SIX4Q9UIU6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIX4Q9UIU6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 TPSP2-201ENST00000561760 610 ntBASIC19.46■□□□□ 0.71
SIX4Q9UIU6 AC090616.6-201ENST00000582640 721 ntBASIC19.46■□□□□ 0.71
SIX4Q9UIU6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.46■□□□□ 0.71
SIX4Q9UIU6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 TSPY12P-201ENST00000421279 868 ntBASIC19.45■□□□□ 0.7
SIX4Q9UIU6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 IGHV3-41-201ENST00000613121 348 ntBASIC19.45■□□□□ 0.7
SIX4Q9UIU6 AC124864.1-201ENST00000623408 392 ntBASIC19.45■□□□□ 0.7
SIX4Q9UIU6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 KRT18P1-202ENST00000452408 1331 ntBASIC19.45■□□□□ 0.7
SIX4Q9UIU6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIX4Q9UIU6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX4Q9UIU6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms