Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 AC068880.1-201ENST00000507289 2297 ntBASIC17.1■□□□□ 0.33
CNIH4Q9P003 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH4Q9P003 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH4Q9P003 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.1■□□□□ 0.33
CNIH4Q9P003 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH4Q9P003 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH4Q9P003 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH4Q9P003 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH4Q9P003 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH4Q9P003 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH4Q9P003 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH4Q9P003 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH4Q9P003 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 NOC2LP2-201ENST00000407594 1944 ntBASIC17.09■□□□□ 0.33
CNIH4Q9P003 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 HOXB1-202ENST00000577092 1414 ntBASIC17.09■□□□□ 0.33
CNIH4Q9P003 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 AC034236.2-201ENST00000606662 1610 ntBASIC17.09■□□□□ 0.33
CNIH4Q9P003 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CNIH4Q9P003 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH4Q9P003 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNIH4Q9P003 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CNIH4Q9P003 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
CNIH4Q9P003 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.08■□□□□ 0.33
CNIH4Q9P003 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.08■□□□□ 0.33
CNIH4Q9P003 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.08■□□□□ 0.33
CNIH4Q9P003 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.08■□□□□ 0.33
CNIH4Q9P003 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNIH4Q9P003 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH4Q9P003 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH4Q9P003 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH4Q9P003 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH4Q9P003 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.08■□□□□ 0.32
CNIH4Q9P003 STARP1-201ENST00000397973 869 ntBASIC17.08■□□□□ 0.32
CNIH4Q9P003 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.08■□□□□ 0.32
CNIH4Q9P003 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.08■□□□□ 0.32
CNIH4Q9P003 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CNIH4Q9P003 AC087388.1-201ENST00000571370 1112 ntBASIC17.08■□□□□ 0.32
CNIH4Q9P003 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CNIH4Q9P003 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH4Q9P003 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CNIH4Q9P003 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CNIH4Q9P003 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.08■□□□□ 0.32
CNIH4Q9P003 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH4Q9P003 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
CNIH4Q9P003 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH4Q9P003 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CNIH4Q9P003 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH4Q9P003 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.08■□□□□ 0.32
CNIH4Q9P003 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH4Q9P003 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH4Q9P003 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH4Q9P003 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH4Q9P003 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH4Q9P003 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 KRT18P23-201ENST00000435622 1283 ntBASIC17.07■□□□□ 0.32
CNIH4Q9P003 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH4Q9P003 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 AC024243.1-201ENST00000609234 778 ntBASIC17.07■□□□□ 0.32
CNIH4Q9P003 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH4Q9P003 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH4Q9P003 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.07■□□□□ 0.32
CNIH4Q9P003 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNIH4Q9P003 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms