Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FAM210CP-201ENST00000445714 574 ntBASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 AC083849.1-201ENST00000615227 514 ntBASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BLOC1S4Q9NUP1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 VENTXP5-201ENST00000523979 775 ntBASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 KRT89P-201ENST00000620027 1478 ntBASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BLOC1S4Q9NUP1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 AC068880.1-201ENST00000507289 2297 ntBASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 MIR662-201ENST00000384847 95 ntBASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 AC113404.2-201ENST00000507884 177 ntBASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BLOC1S4Q9NUP1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BLOC1S4Q9NUP1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BLOC1S4Q9NUP1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BLOC1S4Q9NUP1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 AC092647.4-201ENST00000457211 535 ntBASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms