Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 SDHAP2-201ENST00000455183 2001 ntBASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 AC009102.3-201ENST00000623118 1491 ntBASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE2Q9NRR3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CDC42SE2Q9NRR3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CDC42SE2Q9NRR3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CDC42SE2Q9NRR3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 MIR149-201ENST00000384879 89 ntBASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 MESTP1-201ENST00000404287 994 ntBASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 MIR3180-5-201ENST00000583743 153 ntBASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CDC42SE2Q9NRR3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 AC006116.8-202ENST00000587620 1550 ntBASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 AC128676.1-201ENST00000454392 318 ntBASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 CA15P1-201ENST00000481698 905 ntBASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 RPPH1-201ENST00000516869 333 ntBASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 DGCR10-201ENST00000609839 495 ntBASIC12.57□□□□□ -0.4
CDC42SE2Q9NRR3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms