Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.89■□□□□ 0.77
HIPK3Q9H422 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.89■□□□□ 0.77
HIPK3Q9H422 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIPK3Q9H422 AL024508.2-201ENST00000607749 1894 ntBASIC19.89■□□□□ 0.77
HIPK3Q9H422 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HIPK3Q9H422 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.89■□□□□ 0.77
HIPK3Q9H422 AC008735.5-201ENST00000623544 497 ntBASIC19.89■□□□□ 0.77
HIPK3Q9H422 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIPK3Q9H422 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.89■□□□□ 0.77
HIPK3Q9H422 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.88■□□□□ 0.77
HIPK3Q9H422 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 DNAJB3-201ENST00000446806 729 ntBASIC19.88■□□□□ 0.77
HIPK3Q9H422 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 AC040169.1-201ENST00000565382 521 ntBASIC19.88■□□□□ 0.77
HIPK3Q9H422 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 AL139288.1-201ENST00000623748 933 ntBASIC19.88■□□□□ 0.77
HIPK3Q9H422 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 AC083906.6-201ENST00000641366 219 ntBASIC19.88■□□□□ 0.77
HIPK3Q9H422 AC079781.4-201ENST00000641908 219 ntBASIC19.88■□□□□ 0.77
HIPK3Q9H422 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
HIPK3Q9H422 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HIPK3Q9H422 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
HIPK3Q9H422 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.87■□□□□ 0.77
HIPK3Q9H422 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HIPK3Q9H422 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HIPK3Q9H422 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 SDHAP2-201ENST00000455183 2001 ntBASIC19.87■□□□□ 0.77
HIPK3Q9H422 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HIPK3Q9H422 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.87■□□□□ 0.77
HIPK3Q9H422 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.87■□□□□ 0.77
HIPK3Q9H422 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.87■□□□□ 0.77
HIPK3Q9H422 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.87■□□□□ 0.77
HIPK3Q9H422 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.87■□□□□ 0.77
HIPK3Q9H422 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.87■□□□□ 0.77
HIPK3Q9H422 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HIPK3Q9H422 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.86■□□□□ 0.77
HIPK3Q9H422 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.86■□□□□ 0.77
HIPK3Q9H422 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.86■□□□□ 0.77
HIPK3Q9H422 AC112482.1-201ENST00000492080 688 ntBASIC19.86■□□□□ 0.77
HIPK3Q9H422 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.86■□□□□ 0.77
HIPK3Q9H422 LINC00602-201ENST00000629776 2065 ntBASIC19.86■□□□□ 0.77
HIPK3Q9H422 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HIPK3Q9H422 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.86■□□□□ 0.77
HIPK3Q9H422 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HIPK3Q9H422 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms