Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRDQ9H2X0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 SDHAP2-201ENST00000455183 2001 ntBASIC18.23■□□□□ 0.51
CHRDQ9H2X0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 AP002414.3-201ENST00000589352 1468 ntBASIC18.23■□□□□ 0.51
CHRDQ9H2X0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 LAGE3P1-201ENST00000425356 484 ntBASIC18.23■□□□□ 0.51
CHRDQ9H2X0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRDQ9H2X0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 KRT18P65-201ENST00000439811 1286 ntBASIC18.22■□□□□ 0.51
CHRDQ9H2X0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRDQ9H2X0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDQ9H2X0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CHRDQ9H2X0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.21■□□□□ 0.51
CHRDQ9H2X0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CHRDQ9H2X0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDQ9H2X0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDQ9H2X0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDQ9H2X0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDQ9H2X0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRDQ9H2X0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms