Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC68Q9H2F9 CROCCP1-201ENST00000426910 5675 ntBASIC18.32■□□□□ 0.52
CCDC68Q9H2F9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 AL512604.3-201ENST00000569583 964 ntBASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC68Q9H2F9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 NOC2LP1-202ENST00000452600 2235 ntBASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC68Q9H2F9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 AC135776.1-201ENST00000319817 2481 ntBASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 GMCL1P1-201ENST00000463439 1581 ntBASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC68Q9H2F9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC68Q9H2F9 CYP2D8P-201ENST00000433633 1490 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms