Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 AL359075.1-203ENST00000462729 1002 ntBASIC19.24■□□□□ 0.67
LHX5Q9H2C1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 DUTP2-201ENST00000519164 463 ntBASIC19.23■□□□□ 0.67
LHX5Q9H2C1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.23■□□□□ 0.67
LHX5Q9H2C1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX5Q9H2C1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 MIR662-201ENST00000384847 95 ntBASIC19.22■□□□□ 0.67
LHX5Q9H2C1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 SLC25A6P5-201ENST00000435663 894 ntBASIC19.22■□□□□ 0.67
LHX5Q9H2C1 AC112907.2-201ENST00000448639 330 ntBASIC19.22■□□□□ 0.67
LHX5Q9H2C1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LHX5Q9H2C1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 AC132938.6-201ENST00000623828 1655 ntBASIC19.21■□□□□ 0.67
LHX5Q9H2C1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 AC007613.1-201ENST00000572811 2597 ntBASIC19.21■□□□□ 0.67
LHX5Q9H2C1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 AL031133.1-201ENST00000406807 723 ntBASIC19.21■□□□□ 0.67
LHX5Q9H2C1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 LINC00167-201ENST00000530583 1419 ntBASIC19.21■□□□□ 0.67
LHX5Q9H2C1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms