Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 AL096828.2-201ENST00000567259 1965 ntBASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
COMMD4Q9H0A8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
COMMD4Q9H0A8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.14■□□□□ 0.18
COMMD4Q9H0A8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 CR392000.1-201ENST00000624770 1228 ntBASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD4Q9H0A8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 AC034236.2-201ENST00000606662 1610 ntBASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 MCCD1P1-208ENST00000445732 328 ntBASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD4Q9H0A8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms