Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC11.38□□□□□ -0.59
KRTAP3-3Q9BYR6 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AL627309.5-203ENST00000466557 1301 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 MYCNOS-202ENST00000641263 1313 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 WDR78-201ENST00000371022 1520 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC104772.2-201ENST00000412747 613 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC009310.1-201ENST00000414414 451 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC010983.1-201ENST00000418387 1028 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 Z74696.2-201ENST00000436514 498 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC097382.1-201ENST00000441093 591 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 GTF2IP14-201ENST00000441415 586 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 WASF1P1-201ENST00000447560 1131 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 ECEL1P2-201ENST00000461596 1295 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 MTCYBP17-201ENST00000503579 789 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 SUDS3P1-201ENST00000505831 966 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 SUB1-213ENST00000515355 771 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 Y_RNA.702-201ENST00000516843 96 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AP001317.1-201ENST00000531194 960 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 SLAMF1-204ENST00000538290 1087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 PDCD6IPP2-207ENST00000566321 1069 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC093536.1-201ENST00000569153 554 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 RPL17-207ENST00000580210 705 ntTSL 2 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC007292.3-201ENST00000594776 357 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AP000811.1-201ENST00000603803 651 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC087045.1-201ENST00000605856 382 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC073389.3-201ENST00000609434 935 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 PDCD6IPP1-202ENST00000622242 1064 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC095031.1-201ENST00000623685 672 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AP003499.3-201ENST00000624680 857 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC073592.10-201ENST00000624789 597 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 LEAP2-201ENST00000296877 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 C1GALT1C1-202ENST00000371313 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC066616.2-201ENST00000559334 1481 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 AC012508.2-201ENST00000567613 1472 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 CCT6P2-201ENST00000507234 1593 ntBASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP3-3Q9BYR6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms