Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 KRT8P41-201ENST00000533985 1514 ntBASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 AC096733.2-201ENST00000609937 1394 ntBASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.25■□□□□ 0.35
TUBA1CQ9BQE3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 FEM1AP3-201ENST00000403722 1741 ntBASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TUBA1CQ9BQE3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 TSPY14P-201ENST00000303979 915 ntBASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 EGLN1P1-201ENST00000531623 762 ntBASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBA1CQ9BQE3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBA1CQ9BQE3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms