Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 LINC01311-201ENST00000565162 1445 ntBASIC16.29■□□□□ 0.2
USB1Q9BQ65 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.29■□□□□ 0.2
USB1Q9BQ65 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 PCED1CP-201ENST00000419887 785 ntBASIC16.29■□□□□ 0.2
USB1Q9BQ65 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.29■□□□□ 0.2
USB1Q9BQ65 MIR3917-201ENST00000580971 93 ntBASIC16.29■□□□□ 0.2
USB1Q9BQ65 AC024243.1-201ENST00000609234 778 ntBASIC16.29■□□□□ 0.2
USB1Q9BQ65 AL358472.4-201ENST00000633140 710 ntBASIC16.29■□□□□ 0.2
USB1Q9BQ65 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
USB1Q9BQ65 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
USB1Q9BQ65 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USB1Q9BQ65 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.29■□□□□ 0.2
USB1Q9BQ65 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 IER3-202ENST00000376377 1350 ntBASIC16.28■□□□□ 0.2
USB1Q9BQ65 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 AP000593.1-201ENST00000393668 712 ntBASIC16.28■□□□□ 0.2
USB1Q9BQ65 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 SEC1P-202ENST00000473944 940 ntBASIC16.28■□□□□ 0.2
USB1Q9BQ65 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 VENTXP5-201ENST00000523979 775 ntBASIC16.28■□□□□ 0.2
USB1Q9BQ65 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 AC068587.9-201ENST00000641814 219 ntBASIC16.28■□□□□ 0.2
USB1Q9BQ65 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USB1Q9BQ65 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.28■□□□□ 0.2
USB1Q9BQ65 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USB1Q9BQ65 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USB1Q9BQ65 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USB1Q9BQ65 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USB1Q9BQ65 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USB1Q9BQ65 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
USB1Q9BQ65 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
USB1Q9BQ65 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USB1Q9BQ65 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 AC116407.4-201ENST00000623319 1061 ntBASIC16.27■□□□□ 0.2
USB1Q9BQ65 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 AC008556.1-201ENST00000610908 2040 ntBASIC16.27■□□□□ 0.2
USB1Q9BQ65 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USB1Q9BQ65 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.27■□□□□ 0.2
USB1Q9BQ65 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
USB1Q9BQ65 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
USB1Q9BQ65 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
USB1Q9BQ65 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
USB1Q9BQ65 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
USB1Q9BQ65 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
USB1Q9BQ65 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms