Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
VGLL1Q99990 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VGLL1Q99990 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.87□□□□□ -0.19
VGLL1Q99990 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
VGLL1Q99990 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
VGLL1Q99990 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.87□□□□□ -0.19
VGLL1Q99990 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VGLL1Q99990 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.86□□□□□ -0.19
VGLL1Q99990 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.86□□□□□ -0.19
VGLL1Q99990 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.86□□□□□ -0.19
VGLL1Q99990 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.86□□□□□ -0.19
VGLL1Q99990 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VGLL1Q99990 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 AC099343.3-201ENST00000605834 2503 ntBASIC13.86□□□□□ -0.19
VGLL1Q99990 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.86□□□□□ -0.19
VGLL1Q99990 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.86□□□□□ -0.19
VGLL1Q99990 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VGLL1Q99990 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.86□□□□□ -0.19
VGLL1Q99990 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VGLL1Q99990 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VGLL1Q99990 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.85□□□□□ -0.19
VGLL1Q99990 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
VGLL1Q99990 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
VGLL1Q99990 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 SLC25A6P5-201ENST00000435663 894 ntBASIC13.85□□□□□ -0.19
VGLL1Q99990 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.85□□□□□ -0.19
VGLL1Q99990 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.85□□□□□ -0.19
VGLL1Q99990 C1QBPP2-201ENST00000528754 825 ntBASIC13.85□□□□□ -0.19
VGLL1Q99990 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.85□□□□□ -0.19
VGLL1Q99990 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.85□□□□□ -0.19
VGLL1Q99990 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.85□□□□□ -0.19
VGLL1Q99990 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VGLL1Q99990 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.85□□□□□ -0.19
VGLL1Q99990 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.85□□□□□ -0.19
VGLL1Q99990 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VGLL1Q99990 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VGLL1Q99990 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VGLL1Q99990 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.85□□□□□ -0.19
VGLL1Q99990 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.85□□□□□ -0.19
VGLL1Q99990 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.85□□□□□ -0.19
VGLL1Q99990 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VGLL1Q99990 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.84□□□□□ -0.19
VGLL1Q99990 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.84□□□□□ -0.19
VGLL1Q99990 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms