Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDCA3Q99618 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.92■□□□□ 0.62
CDCA3Q99618 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.92■□□□□ 0.62
CDCA3Q99618 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDCA3Q99618 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDCA3Q99618 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDCA3Q99618 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.91■□□□□ 0.62
CDCA3Q99618 AP006288.1-201ENST00000446065 395 ntBASIC18.91■□□□□ 0.62
CDCA3Q99618 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.91■□□□□ 0.62
CDCA3Q99618 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.91■□□□□ 0.62
CDCA3Q99618 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.91■□□□□ 0.62
CDCA3Q99618 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.91■□□□□ 0.62
CDCA3Q99618 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.91■□□□□ 0.62
CDCA3Q99618 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.91■□□□□ 0.62
CDCA3Q99618 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDCA3Q99618 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.91■□□□□ 0.62
CDCA3Q99618 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDCA3Q99618 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDCA3Q99618 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA3Q99618 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.9■□□□□ 0.62
CDCA3Q99618 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.9■□□□□ 0.62
CDCA3Q99618 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CDCA3Q99618 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.9■□□□□ 0.62
CDCA3Q99618 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA3Q99618 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.9■□□□□ 0.62
CDCA3Q99618 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA3Q99618 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDCA3Q99618 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA3Q99618 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA3Q99618 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA3Q99618 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
CDCA3Q99618 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDCA3Q99618 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDCA3Q99618 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDCA3Q99618 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.9■□□□□ 0.62
CDCA3Q99618 AC211486.1-202ENST00000416371 468 ntBASIC18.9■□□□□ 0.62
CDCA3Q99618 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.9■□□□□ 0.62
CDCA3Q99618 KRT18P27-201ENST00000427733 1299 ntBASIC18.9■□□□□ 0.62
CDCA3Q99618 DNAJB3-202ENST00000449667 1266 ntBASIC18.9■□□□□ 0.62
CDCA3Q99618 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA3Q99618 AC211476.1-201ENST00000503899 468 ntBASIC18.9■□□□□ 0.62
CDCA3Q99618 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA3Q99618 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.9■□□□□ 0.62
CDCA3Q99618 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.9■□□□□ 0.62
CDCA3Q99618 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.9■□□□□ 0.62
CDCA3Q99618 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA3Q99618 LINC02084-201ENST00000606069 1096 ntBASIC18.9■□□□□ 0.62
CDCA3Q99618 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
CDCA3Q99618 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.9■□□□□ 0.62
CDCA3Q99618 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA3Q99618 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CDCA3Q99618 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.9■□□□□ 0.62
CDCA3Q99618 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CDCA3Q99618 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.9■□□□□ 0.62
CDCA3Q99618 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.9■□□□□ 0.62
CDCA3Q99618 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDCA3Q99618 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.9■□□□□ 0.62
CDCA3Q99618 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDCA3Q99618 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDCA3Q99618 LINC01126-201ENST00000623515 1646 ntBASIC18.89■□□□□ 0.62
CDCA3Q99618 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA3Q99618 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.89■□□□□ 0.61
CDCA3Q99618 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.89■□□□□ 0.61
CDCA3Q99618 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA3Q99618 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA3Q99618 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.89■□□□□ 0.61
CDCA3Q99618 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.89■□□□□ 0.61
CDCA3Q99618 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDCA3Q99618 PRYP5-201ENST00000451909 266 ntBASIC18.89■□□□□ 0.61
CDCA3Q99618 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDCA3Q99618 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.89■□□□□ 0.61
CDCA3Q99618 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.89■□□□□ 0.61
CDCA3Q99618 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.89■□□□□ 0.61
CDCA3Q99618 AC073592.4-201ENST00000623827 446 ntBASIC18.89■□□□□ 0.61
CDCA3Q99618 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA3Q99618 AC022898.2-201ENST00000616822 1312 ntBASIC18.89■□□□□ 0.61
CDCA3Q99618 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA3Q99618 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDCA3Q99618 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.89■□□□□ 0.61
CDCA3Q99618 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDCA3Q99618 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDCA3Q99618 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.89■□□□□ 0.61
CDCA3Q99618 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDCA3Q99618 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.88■□□□□ 0.61
CDCA3Q99618 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms