Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.77■□□□□ 0.43
PKP4Q99569 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PKP4Q99569 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PKP4Q99569 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PKP4Q99569 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PKP4Q99569 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PKP4Q99569 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.77■□□□□ 0.43
PKP4Q99569 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PKP4Q99569 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PKP4Q99569 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PKP4Q99569 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PKP4Q99569 AL390961.4-201ENST00000623958 2535 ntBASIC17.76■□□□□ 0.43
PKP4Q99569 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PKP4Q99569 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.76■□□□□ 0.43
PKP4Q99569 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.76■□□□□ 0.43
PKP4Q99569 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 AC022616.7-201ENST00000525383 220 ntBASIC17.76■□□□□ 0.43
PKP4Q99569 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.76■□□□□ 0.43
PKP4Q99569 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.76■□□□□ 0.43
PKP4Q99569 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PKP4Q99569 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.76■□□□□ 0.43
PKP4Q99569 AL136038.4-201ENST00000603606 1261 ntBASIC17.76■□□□□ 0.43
PKP4Q99569 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.76■□□□□ 0.43
PKP4Q99569 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PKP4Q99569 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PKP4Q99569 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
PKP4Q99569 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.76■□□□□ 0.43
PKP4Q99569 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PKP4Q99569 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.76■□□□□ 0.43
PKP4Q99569 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.75■□□□□ 0.43
PKP4Q99569 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.75■□□□□ 0.43
PKP4Q99569 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.75■□□□□ 0.43
PKP4Q99569 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.75■□□□□ 0.43
PKP4Q99569 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.75■□□□□ 0.43
PKP4Q99569 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
PKP4Q99569 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.75■□□□□ 0.43
PKP4Q99569 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.75■□□□□ 0.43
PKP4Q99569 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.75■□□□□ 0.43
PKP4Q99569 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PKP4Q99569 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.75■□□□□ 0.43
PKP4Q99569 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.74■□□□□ 0.43
PKP4Q99569 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.74■□□□□ 0.43
PKP4Q99569 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PKP4Q99569 FAM8A6P-201ENST00000407496 1135 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms