Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHOX2BQ99453 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PHOX2BQ99453 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PHOX2BQ99453 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PHOX2BQ99453 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHOX2BQ99453 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHOX2BQ99453 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHOX2BQ99453 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PHOX2BQ99453 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHOX2BQ99453 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PHOX2BQ99453 RBM17P3-201ENST00000417687 1192 ntBASIC18.42■□□□□ 0.54
PHOX2BQ99453 HLA-V-201ENST00000429037 534 ntBASIC18.42■□□□□ 0.54
PHOX2BQ99453 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PHOX2BQ99453 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.42■□□□□ 0.54
PHOX2BQ99453 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PHOX2BQ99453 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.42■□□□□ 0.54
PHOX2BQ99453 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.42■□□□□ 0.54
PHOX2BQ99453 AC010240.3-201ENST00000607688 395 ntBASIC18.42■□□□□ 0.54
PHOX2BQ99453 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.42■□□□□ 0.54
PHOX2BQ99453 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.42■□□□□ 0.54
PHOX2BQ99453 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHOX2BQ99453 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHOX2BQ99453 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.42■□□□□ 0.54
PHOX2BQ99453 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PHOX2BQ99453 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PHOX2BQ99453 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHOX2BQ99453 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHOX2BQ99453 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHOX2BQ99453 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PHOX2BQ99453 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.41■□□□□ 0.54
PHOX2BQ99453 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 OR7E14P-202ENST00000530490 1290 ntBASIC18.41■□□□□ 0.54
PHOX2BQ99453 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 AC093028.1-201ENST00000622998 982 ntBASIC18.41■□□□□ 0.54
PHOX2BQ99453 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PHOX2BQ99453 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHOX2BQ99453 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PHOX2BQ99453 AC063926.2-201ENST00000623766 1308 ntBASIC18.41■□□□□ 0.54
PHOX2BQ99453 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHOX2BQ99453 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHOX2BQ99453 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PHOX2BQ99453 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PHOX2BQ99453 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 AL691432.2-201ENST00000607222 2038 ntBASIC18.4■□□□□ 0.54
PHOX2BQ99453 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.4■□□□□ 0.54
PHOX2BQ99453 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PHOX2BQ99453 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PHOX2BQ99453 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
PHOX2BQ99453 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.39■□□□□ 0.54
PHOX2BQ99453 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 TCF3P1-201ENST00000423021 1937 ntBASIC18.39■□□□□ 0.53
PHOX2BQ99453 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms