Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 MIR2861-201ENST00000636310 90 ntBASIC15.66■□□□□ 0.1
CITED4Q96RK1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CITED4Q96RK1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CITED4Q96RK1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.65■□□□□ 0.1
CITED4Q96RK1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 TEX21P-204ENST00000641479 1693 ntBASIC15.65■□□□□ 0.1
CITED4Q96RK1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CITED4Q96RK1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 AP001094.4-201ENST00000579008 2176 ntBASIC15.65■□□□□ 0.1
CITED4Q96RK1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.65■□□□□ 0.1
CITED4Q96RK1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.64■□□□□ 0.1
CITED4Q96RK1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.64■□□□□ 0.1
CITED4Q96RK1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CITED4Q96RK1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.64■□□□□ 0.09
CITED4Q96RK1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CITED4Q96RK1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.64■□□□□ 0.09
CITED4Q96RK1 SLC29A4P1-201ENST00000398760 971 ntBASIC15.64■□□□□ 0.09
CITED4Q96RK1 AC007322.1-201ENST00000426983 750 ntBASIC15.64■□□□□ 0.09
CITED4Q96RK1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.64■□□□□ 0.09
CITED4Q96RK1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.64■□□□□ 0.09
CITED4Q96RK1 SLC7A5P2-201ENST00000553010 536 ntBASIC15.64■□□□□ 0.09
CITED4Q96RK1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.64■□□□□ 0.09
CITED4Q96RK1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.64■□□□□ 0.09
CITED4Q96RK1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.64■□□□□ 0.09
CITED4Q96RK1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.64■□□□□ 0.09
CITED4Q96RK1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.64■□□□□ 0.09
CITED4Q96RK1 AC132872.4-202ENST00000622924 2756 ntBASIC15.64■□□□□ 0.09
CITED4Q96RK1 MYCNOS-205ENST00000641950 531 ntBASIC15.64■□□□□ 0.09
CITED4Q96RK1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CITED4Q96RK1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms