Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 AC009078.2-202ENST00000463353 338 ntBASIC14.84□□□□□ -0.03
ZNF48Q96MX3 AC104819.1-201ENST00000504587 486 ntBASIC14.84□□□□□ -0.03
ZNF48Q96MX3 KRT18P31-201ENST00000506277 1292 ntBASIC14.84□□□□□ -0.03
ZNF48Q96MX3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 AC024563.2-201ENST00000603282 481 ntBASIC14.84□□□□□ -0.03
ZNF48Q96MX3 AC138894.3-201ENST00000603787 634 ntBASIC14.84□□□□□ -0.03
ZNF48Q96MX3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 AC233702.3-201ENST00000578656 1387 ntBASIC14.84□□□□□ -0.03
ZNF48Q96MX3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.84□□□□□ -0.03
ZNF48Q96MX3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
ZNF48Q96MX3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF48Q96MX3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF48Q96MX3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF48Q96MX3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF48Q96MX3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.83□□□□□ -0.03
ZNF48Q96MX3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF48Q96MX3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
ZNF48Q96MX3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ZNF48Q96MX3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 AL357033.4-201ENST00000617703 1807 ntBASIC14.83□□□□□ -0.04
ZNF48Q96MX3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 AC079781.3-201ENST00000449110 356 ntBASIC14.83□□□□□ -0.04
ZNF48Q96MX3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 AC104692.2-201ENST00000603054 253 ntBASIC14.83□□□□□ -0.04
ZNF48Q96MX3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 AL592071.1-201ENST00000611956 408 ntBASIC14.83□□□□□ -0.04
ZNF48Q96MX3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 KRT8P50-201ENST00000562022 1438 ntBASIC14.83□□□□□ -0.04
ZNF48Q96MX3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ZNF48Q96MX3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 HEIH-201ENST00000623091 1652 ntBASIC14.82□□□□□ -0.04
ZNF48Q96MX3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 AP000347.1-202ENST00000435868 847 ntBASIC14.82□□□□□ -0.04
ZNF48Q96MX3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 AC124864.1-201ENST00000623408 392 ntBASIC14.82□□□□□ -0.04
ZNF48Q96MX3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
ZNF48Q96MX3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF48Q96MX3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF48Q96MX3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF48Q96MX3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZNF48Q96MX3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms