Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 TSPY6P-201ENST00000448518 926 ntBASIC18.03■□□□□ 0.48
SPDL1Q96EA4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 HLA-A-209ENST00000638375 975 ntBASIC18.03■□□□□ 0.48
SPDL1Q96EA4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPDL1Q96EA4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.02■□□□□ 0.48
SPDL1Q96EA4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.02■□□□□ 0.48
SPDL1Q96EA4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
SPDL1Q96EA4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPDL1Q96EA4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPDL1Q96EA4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPDL1Q96EA4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.02■□□□□ 0.47
SPDL1Q96EA4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
SPDL1Q96EA4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.02■□□□□ 0.47
SPDL1Q96EA4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPDL1Q96EA4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 AC083880.1-201ENST00000608266 535 ntBASIC18.01■□□□□ 0.47
SPDL1Q96EA4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SPDL1Q96EA4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18■□□□□ 0.47
SPDL1Q96EA4 FLJ38576-201ENST00000623820 2459 ntBASIC18■□□□□ 0.47
SPDL1Q96EA4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SPDL1Q96EA4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 AC108860.2-201ENST00000562760 2183 ntBASIC18■□□□□ 0.47
SPDL1Q96EA4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18■□□□□ 0.47
SPDL1Q96EA4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18■□□□□ 0.47
SPDL1Q96EA4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SPDL1Q96EA4 UBALD1-205ENST00000590891 2641 ntBASIC18■□□□□ 0.47
SPDL1Q96EA4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SPDL1Q96EA4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18■□□□□ 0.47
SPDL1Q96EA4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SPDL1Q96EA4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18■□□□□ 0.47
SPDL1Q96EA4 PPP1R14BP3-201ENST00000509033 445 ntBASIC18■□□□□ 0.47
SPDL1Q96EA4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18■□□□□ 0.47
SPDL1Q96EA4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18■□□□□ 0.47
SPDL1Q96EA4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18■□□□□ 0.47
SPDL1Q96EA4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18■□□□□ 0.47
SPDL1Q96EA4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18■□□□□ 0.47
SPDL1Q96EA4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SPDL1Q96EA4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 OR6D1P-203ENST00000641209 4860 ntBASIC18■□□□□ 0.47
SPDL1Q96EA4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPDL1Q96EA4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SPDL1Q96EA4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18■□□□□ 0.47
SPDL1Q96EA4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms