Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE4Q96A23 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.38■□□□□ 0.21
CPNE4Q96A23 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE4Q96A23 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.38■□□□□ 0.21
CPNE4Q96A23 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 AP000550.4-202ENST00000639755 178 ntBASIC16.37■□□□□ 0.21
CPNE4Q96A23 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 AL162741.1-201ENST00000565563 1558 ntBASIC16.37■□□□□ 0.21
CPNE4Q96A23 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE4Q96A23 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE4Q96A23 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 GMCL1P1-201ENST00000463439 1581 ntBASIC16.36■□□□□ 0.21
CPNE4Q96A23 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 IER3-202ENST00000376377 1350 ntBASIC16.36■□□□□ 0.21
CPNE4Q96A23 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE4Q96A23 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CPNE4Q96A23 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 AC005082.1-201ENST00000413042 2259 ntBASIC16.35■□□□□ 0.21
CPNE4Q96A23 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 AP003733.1-201ENST00000491725 852 ntBASIC16.35■□□□□ 0.21
CPNE4Q96A23 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 AC116407.4-201ENST00000623319 1061 ntBASIC16.35■□□□□ 0.21
CPNE4Q96A23 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 AL358472.4-201ENST00000633140 710 ntBASIC16.35■□□□□ 0.21
CPNE4Q96A23 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CPNE4Q96A23 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE4Q96A23 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms