Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V0A1Q93050 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP6V0A1Q93050 AC073592.3-201ENST00000625118 1834 ntBASIC20.39■□□□□ 0.85
ATP6V0A1Q93050 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 RN7SL606P-201ENST00000472779 293 ntBASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A1Q93050 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 AC009078.2-202ENST00000463353 338 ntBASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A1Q93050 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 AC079781.3-201ENST00000449110 356 ntBASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 AC104692.2-201ENST00000603054 253 ntBASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 AC004263.2-201ENST00000617183 678 ntBASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 GMCL1P1-201ENST00000463439 1581 ntBASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A1Q93050 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms