Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.7■□□□□ 0.26
HPS1Q92902 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
HPS1Q92902 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.7■□□□□ 0.26
HPS1Q92902 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.7■□□□□ 0.26
HPS1Q92902 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HPS1Q92902 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HPS1Q92902 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 AL353807.1-201ENST00000427475 662 ntBASIC16.7■□□□□ 0.26
HPS1Q92902 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.7■□□□□ 0.26
HPS1Q92902 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.7■□□□□ 0.26
HPS1Q92902 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.7■□□□□ 0.26
HPS1Q92902 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.7■□□□□ 0.26
HPS1Q92902 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.7■□□□□ 0.26
HPS1Q92902 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.7■□□□□ 0.26
HPS1Q92902 BX088651.1-201ENST00000540551 451 ntBASIC16.7■□□□□ 0.26
HPS1Q92902 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.7■□□□□ 0.26
HPS1Q92902 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HPS1Q92902 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HPS1Q92902 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.7■□□□□ 0.26
HPS1Q92902 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.7■□□□□ 0.26
HPS1Q92902 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.7■□□□□ 0.26
HPS1Q92902 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPS1Q92902 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS1Q92902 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HPS1Q92902 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
HPS1Q92902 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 AC116351.2-201ENST00000606540 1585 ntBASIC16.69■□□□□ 0.26
HPS1Q92902 AC009237.14-201ENST00000609975 1594 ntBASIC16.69■□□□□ 0.26
HPS1Q92902 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HPS1Q92902 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS1Q92902 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.69■□□□□ 0.26
HPS1Q92902 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.69■□□□□ 0.26
HPS1Q92902 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS1Q92902 TSPY7P-201ENST00000431358 1114 ntBASIC16.69■□□□□ 0.26
HPS1Q92902 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS1Q92902 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HPS1Q92902 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS1Q92902 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS1Q92902 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS1Q92902 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS1Q92902 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS1Q92902 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.69■□□□□ 0.26
HPS1Q92902 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS1Q92902 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HPS1Q92902 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.68■□□□□ 0.26
HPS1Q92902 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS1Q92902 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HPS1Q92902 AC211429.1-201ENST00000415277 523 ntBASIC16.68■□□□□ 0.26
HPS1Q92902 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS1Q92902 KRT16P5-201ENST00000455284 522 ntBASIC16.68■□□□□ 0.26
HPS1Q92902 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS1Q92902 AC113410.3-201ENST00000623366 203 ntBASIC16.68■□□□□ 0.26
HPS1Q92902 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.68■□□□□ 0.26
HPS1Q92902 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms