Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 AC026271.3-201ENST00000571884 352 ntBASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 KRT8P45-201ENST00000414328 1447 ntBASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 FSCN1P1-201ENST00000568912 1481 ntBASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RAB40AQ8WXH6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 AC012313.1-201ENST00000593393 3059 ntBASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 MMP23A-201ENST00000234610 1017 ntBASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 AC087499.1-201ENST00000418141 1075 ntBASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 RBM17P1-201ENST00000453646 1190 ntBASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 LINC01023-201ENST00000606054 436 ntBASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
RAB40AQ8WXH6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 ECEL1P3-201ENST00000427961 737 ntBASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 AL160286.2-201ENST00000567150 934 ntBASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 HLA-A-209ENST00000638375 975 ntBASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAB40AQ8WXH6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms