Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 MYC-209ENST00000641252 345 ntBASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 CROCCP2-202ENST00000412962 2773 ntBASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 AL139384.1-201ENST00000612143 3047 ntBASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.14■□□□□ 0.49
CKAP2Q8WWK9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 AC004264.1-201ENST00000608354 794 ntBASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.13■□□□□ 0.49
CKAP2Q8WWK9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 PRKY-204ENST00000533551 1019 ntBASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 KRT8P50-201ENST00000562022 1438 ntBASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.12■□□□□ 0.49
CKAP2Q8WWK9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 MIR564-202ENST00000385049 94 ntBASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.11■□□□□ 0.49
CKAP2Q8WWK9 AC097658.1-201ENST00000475555 843 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms