Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SH3TC1Q8TE82 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SH3TC1Q8TE82 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SH3TC1Q8TE82 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SH3TC1Q8TE82 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SH3TC1Q8TE82 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 KRT18P67-201ENST00000432816 1264 ntBASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 CROCCP3-202ENST00000420820 1947 ntBASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3TC1Q8TE82 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 TEX30-205ENST00000376029 959 ntTSL 2 BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 AL590627.1-203ENST00000421194 1026 ntBASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 AC009533.2-201ENST00000543664 586 ntBASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
SH3TC1Q8TE82 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 DANCR-204ENST00000444958 709 ntTSL 3 BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SH3TC1Q8TE82 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 MED22-202ENST00000371999 987 ntTSL 3 BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 KRT18P65-201ENST00000439811 1286 ntBASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 GZMM-202ENST00000592501 941 ntTSL 3 BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 AC148477.8-201ENST00000624298 468 ntBASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
SH3TC1Q8TE82 AC005082.1-201ENST00000413042 2259 ntBASIC22.64■■□□□ 1.21
SH3TC1Q8TE82 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.64■■□□□ 1.21
SH3TC1Q8TE82 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SH3TC1Q8TE82 AC125634.1-201ENST00000438758 1403 ntBASIC22.64■■□□□ 1.21
SH3TC1Q8TE82 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3TC1Q8TE82 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SH3TC1Q8TE82 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SH3TC1Q8TE82 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3TC1Q8TE82 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3TC1Q8TE82 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3TC1Q8TE82 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SH3TC1Q8TE82 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms