Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD6Q8TD26 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 SLC25A39P2-201ENST00000537614 270 ntBASIC16.32■□□□□ 0.2
CHD6Q8TD26 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 AC096734.2-201ENST00000562054 433 ntBASIC16.32■□□□□ 0.2
CHD6Q8TD26 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 AC138969.3-201ENST00000546612 1459 ntBASIC16.32■□□□□ 0.2
CHD6Q8TD26 AC138932.2-201ENST00000548268 1459 ntBASIC16.32■□□□□ 0.2
CHD6Q8TD26 AC126755.4-201ENST00000549796 1459 ntBASIC16.32■□□□□ 0.2
CHD6Q8TD26 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD6Q8TD26 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.32■□□□□ 0.2
CHD6Q8TD26 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 FAM86MP-201ENST00000340703 885 ntBASIC16.31■□□□□ 0.2
CHD6Q8TD26 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
CHD6Q8TD26 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 TP53TG3HP-202ENST00000569755 579 ntBASIC16.31■□□□□ 0.2
CHD6Q8TD26 AC026740.1-201ENST00000607068 791 ntBASIC16.31■□□□□ 0.2
CHD6Q8TD26 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD6Q8TD26 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD6Q8TD26 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHD6Q8TD26 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD6Q8TD26 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD6Q8TD26 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD6Q8TD26 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD6Q8TD26 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 AC125807.1-201ENST00000483097 614 ntBASIC16.3■□□□□ 0.2
CHD6Q8TD26 IGHV3-65-201ENST00000523210 341 ntBASIC16.3■□□□□ 0.2
CHD6Q8TD26 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHD6Q8TD26 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHD6Q8TD26 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.3■□□□□ 0.2
CHD6Q8TD26 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHD6Q8TD26 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHD6Q8TD26 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.29■□□□□ 0.2
CHD6Q8TD26 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD6Q8TD26 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHD6Q8TD26 RCC2P3-201ENST00000418112 1537 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms