Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 PCDH8P1-201ENST00000428983 2773 ntBASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 KRT18P61-201ENST00000585825 1298 ntBASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 BID-214ENST00000617586 542 ntTSL 5 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 AL162727.3-201ENST00000635661 2787 ntBASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 MYLKP1-201ENST00000509077 1580 ntBASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SMIM11BQ8TCY0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 PCDHB19P-201ENST00000570871 2371 ntBASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 AC010980.2-201ENST00000587099 1412 ntBASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 RER1-204ENST00000378518 522 ntTSL 3 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 RPS2P52-201ENST00000469610 820 ntBASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 AC142381.2-201ENST00000566120 298 ntBASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 AC008406.3-201ENST00000620001 1374 ntBASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 KRT8P32-201ENST00000512863 1461 ntBASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM11BQ8TCY0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM11BQ8TCY0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms