Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB3IL1Q8TBN0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 AL109659.2-201ENST00000606809 1674 ntBASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 ABHD17AP1-201ENST00000358206 933 ntBASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 CD99P1-205ENST00000527459 561 ntBASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB3IL1Q8TBN0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 AC098934.4-201ENST00000564127 592 ntBASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 AC006116.8-202ENST00000587620 1550 ntBASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 AL445675.2-201ENST00000620291 557 ntBASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB3IL1Q8TBN0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAB3IL1Q8TBN0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms