Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.1■□□□□ 0.33
NUP43Q8NFH3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 AC141257.4-201ENST00000634557 245 ntBASIC17.1■□□□□ 0.33
NUP43Q8NFH3 AC136944.6-201ENST00000634818 245 ntBASIC17.1■□□□□ 0.33
NUP43Q8NFH3 AC133561.5-201ENST00000635547 218 ntBASIC17.1■□□□□ 0.33
NUP43Q8NFH3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 AC138028.4-201ENST00000564984 1845 ntBASIC17.1■□□□□ 0.33
NUP43Q8NFH3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP43Q8NFH3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 AC073912.3-201ENST00000624414 853 ntBASIC17.09■□□□□ 0.33
NUP43Q8NFH3 AC092865.7-201ENST00000641832 219 ntBASIC17.09■□□□□ 0.33
NUP43Q8NFH3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 LINC01126-201ENST00000623515 1646 ntBASIC17.09■□□□□ 0.33
NUP43Q8NFH3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP43Q8NFH3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NUP43Q8NFH3 AL133373.2-201ENST00000623187 2828 ntBASIC17.08■□□□□ 0.33
NUP43Q8NFH3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
NUP43Q8NFH3 NOC2LP2-201ENST00000407594 1944 ntBASIC17.08■□□□□ 0.33
NUP43Q8NFH3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.08■□□□□ 0.33
NUP43Q8NFH3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 LIN28AP1-201ENST00000429574 405 ntBASIC17.08■□□□□ 0.32
NUP43Q8NFH3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
NUP43Q8NFH3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP43Q8NFH3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms