Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 AC068587.9-201ENST00000641814 219 ntBASIC18.55■□□□□ 0.56
CCDC63Q8NA47 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC63Q8NA47 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 SLC25A6P5-201ENST00000435663 894 ntBASIC18.54■□□□□ 0.56
CCDC63Q8NA47 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.54■□□□□ 0.56
CCDC63Q8NA47 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 AC011270.2-201ENST00000624293 2550 ntBASIC18.54■□□□□ 0.56
CCDC63Q8NA47 AC046158.3-201ENST00000624947 2558 ntBASIC18.54■□□□□ 0.56
CCDC63Q8NA47 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 AC108860.2-201ENST00000562760 2183 ntBASIC18.54■□□□□ 0.56
CCDC63Q8NA47 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 AC008894.3-201ENST00000624324 3103 ntBASIC18.54■□□□□ 0.56
CCDC63Q8NA47 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC63Q8NA47 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC63Q8NA47 AC018695.7-201ENST00000624587 2492 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms