Protein–RNA interactions for Protein: Q8N878

FRMD1, FERM domain-containing protein 1, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD1Q8N878 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FRMD1Q8N878 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.12■□□□□ 0.49
FRMD1Q8N878 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FRMD1Q8N878 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.12■□□□□ 0.49
FRMD1Q8N878 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.12■□□□□ 0.49
FRMD1Q8N878 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.12■□□□□ 0.49
FRMD1Q8N878 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.12■□□□□ 0.49
FRMD1Q8N878 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.12■□□□□ 0.49
FRMD1Q8N878 PMS2P7-201ENST00000506558 1336 ntBASIC18.12■□□□□ 0.49
FRMD1Q8N878 AC005082.1-201ENST00000413042 2259 ntBASIC18.12■□□□□ 0.49
FRMD1Q8N878 AC116562.4-201ENST00000641316 2276 ntBASIC18.12■□□□□ 0.49
FRMD1Q8N878 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.12■□□□□ 0.49
FRMD1Q8N878 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
FRMD1Q8N878 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FRMD1Q8N878 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FRMD1Q8N878 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FRMD1Q8N878 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FRMD1Q8N878 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FRMD1Q8N878 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FRMD1Q8N878 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
FRMD1Q8N878 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 LINC00602-201ENST00000629776 2065 ntBASIC18.11■□□□□ 0.49
FRMD1Q8N878 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 INTS4P1-201ENST00000438455 1935 ntBASIC18.11■□□□□ 0.49
FRMD1Q8N878 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FRMD1Q8N878 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.11■□□□□ 0.49
FRMD1Q8N878 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 MIR1233-2-201ENST00000408138 82 ntBASIC18.1■□□□□ 0.49
FRMD1Q8N878 MIR1233-1-201ENST00000408722 82 ntBASIC18.1■□□□□ 0.49
FRMD1Q8N878 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 MTCL1P1-201ENST00000446207 792 ntBASIC18.1■□□□□ 0.49
FRMD1Q8N878 SCARNA2-201ENST00000458748 420 ntBASIC18.1■□□□□ 0.49
FRMD1Q8N878 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 AC021087.4-201ENST00000563761 564 ntBASIC18.1■□□□□ 0.49
FRMD1Q8N878 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.1■□□□□ 0.49
FRMD1Q8N878 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.1■□□□□ 0.49
FRMD1Q8N878 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FRMD1Q8N878 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
FRMD1Q8N878 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
FRMD1Q8N878 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FRMD1Q8N878 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FRMD1Q8N878 MYLKP1-201ENST00000509077 1580 ntBASIC18.09■□□□□ 0.49
FRMD1Q8N878 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms