Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAM1L1Q8N609 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
TRAM1L1Q8N609 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18■□□□□ 0.47
TRAM1L1Q8N609 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 LINC00167-201ENST00000530583 1419 ntBASIC18■□□□□ 0.47
TRAM1L1Q8N609 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18■□□□□ 0.47
TRAM1L1Q8N609 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 AC069148.1-201ENST00000608741 768 ntBASIC18■□□□□ 0.47
TRAM1L1Q8N609 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18■□□□□ 0.47
TRAM1L1Q8N609 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18■□□□□ 0.47
TRAM1L1Q8N609 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 LINC00602-201ENST00000629776 2065 ntBASIC18■□□□□ 0.47
TRAM1L1Q8N609 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAM1L1Q8N609 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAM1L1Q8N609 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms