Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ARHGEF39Q8N4T4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 AC009154.2-201ENST00000621177 724 ntBASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ARHGEF39Q8N4T4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 KRT18P65-201ENST00000439811 1286 ntBASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 AC068472.1-201ENST00000474589 881 ntBASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 KRT18P1-202ENST00000452408 1331 ntBASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ARHGEF39Q8N4T4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms