Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST3Q8N1M1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST3Q8N1M1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST3Q8N1M1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 PRELID1P1-202ENST00000567272 903 ntBASIC16.94■□□□□ 0.3
BEST3Q8N1M1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 AC024563.2-201ENST00000603282 481 ntBASIC16.94■□□□□ 0.3
BEST3Q8N1M1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BEST3Q8N1M1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 AL163051.1-201ENST00000569214 1512 ntBASIC16.93■□□□□ 0.3
BEST3Q8N1M1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 AL390719.2-201ENST00000606993 987 ntBASIC16.93■□□□□ 0.3
BEST3Q8N1M1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST3Q8N1M1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.92■□□□□ 0.3
BEST3Q8N1M1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.92■□□□□ 0.3
BEST3Q8N1M1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms