Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 LINC00167-201ENST00000530583 1419 ntBASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
C9orf40Q8IXQ3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 AC093458.2-201ENST00000623150 629 ntBASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.81■□□□□ 0.28
C9orf40Q8IXQ3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 TSSC2-201ENST00000450217 709 ntBASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 AC132938.6-201ENST00000623828 1655 ntBASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 AC093010.1-201ENST00000473625 1624 ntBASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 AL096828.2-201ENST00000567259 1965 ntBASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.8■□□□□ 0.28
C9orf40Q8IXQ3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
C9orf40Q8IXQ3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms