Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCUBE3Q8IX30 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SCUBE3Q8IX30 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCUBE3Q8IX30 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCUBE3Q8IX30 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SCUBE3Q8IX30 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCUBE3Q8IX30 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCUBE3Q8IX30 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCUBE3Q8IX30 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 AL162741.1-201ENST00000565563 1558 ntBASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SCUBE3Q8IX30 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.16■□□□□ 0.66
SCUBE3Q8IX30 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 AL096828.2-201ENST00000567259 1965 ntBASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms