Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL3Q8IVW4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.77■□□□□ 0.59
CDKL3Q8IVW4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDKL3Q8IVW4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CDKL3Q8IVW4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CDKL3Q8IVW4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDKL3Q8IVW4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.59
CDKL3Q8IVW4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CDKL3Q8IVW4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 AC093010.1-201ENST00000473625 1624 ntBASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL3Q8IVW4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 LINC01126-201ENST00000623515 1646 ntBASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 ECEL1P2-202ENST00000465689 757 ntBASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 SEC1P-202ENST00000473944 940 ntBASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 AL024508.2-201ENST00000607749 1894 ntBASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL3Q8IVW4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL3Q8IVW4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms