Protein–RNA interactions for Protein: Q8IUZ0

LRRC49, Leucine-rich repeat-containing protein 49, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49Q8IUZ0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
LRRC49Q8IUZ0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LRRC49Q8IUZ0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC49Q8IUZ0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 NEFHP1-201ENST00000412845 2629 ntBASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 HBZP1-201ENST00000354915 429 ntBASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 MIR662-201ENST00000384847 95 ntBASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 HYMAI.1-201ENST00000620949 238 ntBASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LRRC49Q8IUZ0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 AC020763.4-201ENST00000623414 4170 ntBASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 KRT18P48-201ENST00000434763 852 ntBASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 KRT18P38-201ENST00000449496 1282 ntBASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 AL359075.1-203ENST00000462729 1002 ntBASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 DUTP2-201ENST00000519164 463 ntBASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 AC099343.3-201ENST00000605834 2503 ntBASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC49Q8IUZ0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.58■□□□□ 0.57
LRRC49Q8IUZ0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 AC112907.2-201ENST00000448639 330 ntBASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRC49Q8IUZ0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms