Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 ATP5G2P1-201ENST00000433580 426 ntBASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRTM4Q86VH4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 AC090616.6-201ENST00000582640 721 ntBASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM4Q86VH4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 GUSBP12-201ENST00000513727 720 ntBASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 NPAP1P7-201ENST00000613027 823 ntBASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 IGHV3-41-201ENST00000613121 348 ntBASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM4Q86VH4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 KRT18P1-202ENST00000452408 1331 ntBASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRTM4Q86VH4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms