Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00173Q6ZV60 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.25□□□□□ -0.29
LINC00173Q6ZV60 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00173Q6ZV60 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00173Q6ZV60 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00173Q6ZV60 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00173Q6ZV60 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00173Q6ZV60 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 AC068338.2-201ENST00000563278 1430 ntBASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 FER1L4-210ENST00000615531 5998 ntBASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00173Q6ZV60 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 AL096828.2-201ENST00000567259 1965 ntBASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms